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Evidence guide

Payroll and wage evidence

Wages are usually the largest qualified research expense, and the first place an examiner tests whether the claim ties to the records. Three things need to connect: the payroll register, the W-2 file and the amounts claimed, person by person and project by project.

What to provide

  • The payroll register for the tax year, with each employee's wages and work-location code.
  • The year-end W-2 file, or a summary of Box 1 wages by employee.
  • A schedule of qualified wages by employee and business component, with the qualified percentage applied.

What the examiner questions test

  • F5 asks whether the wages claimed reconcile to payroll for each employee. The test is that every employee claimed appears in the register, the W-2 amount agrees, and the total agrees to the wage line supporting Form 6765.
  • F4 asks how each employee's time was split; the payroll evidence supplies the wage base that the percentage is applied to.
  • S1 and S2 use the work-location codes to test where the research was performed.

Common gaps

  • Register totals that do not agree to the W-2 file, usually because of adjustments after year-end.
  • Employees claimed who moved between entities or projects during the year.
  • Wages used for another credit counted again here.
  • No link from an employee to a business component, so wages cannot be assigned to a project.

Terminology

Qualified wages are wages under IRC section 3401(a), in practice W-2 Box 1, for performing, directly supervising or directly supporting qualified research. Keep the federal and state wage bases separate; the state base is limited to research performed in the state.

General in nature, not tax advice.

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